bambu()
long read isoform reconstruction and quantification
plotBambu()
plot.bambu
prepareAnnotations()
prepare reference annotations for long read RNA-Seq analysis with Bambu
readFromGTF()
convert a GTF file into a GRangesList
transcriptToGeneExpression()
transcript to gene expression
writeBambuOutput()
Write bambu results to GTF and transcript/gene-count files
writeToGTF()
write GRangeslist into GTF file